Skip to contents

Get step_ids from recipe

Usage

steps_ids(rec, type = "all")

Arguments

rec

A Recipe object.

type

character vector indicating the type class. Options c("all", "da", "prepro").

Value

character vector

Examples

data(test_rec)

## We can extract the step identifiers from a Recipe with `step_ids`
ids <- steps_ids(test_rec)
ids
#> [1] "subset_taxa__Boyoz"     "filter_taxa__Charlotte" "maaslin__ChaSan"       
#> [4] "metagenomeseq__Zlebia"  "deseq__Linzer_torte"   

## With the `type` parameter, extract the prepro and da steps separately.
da_ids <- steps_ids(test_rec, type = "da")
da_ids
#> [1] "maaslin__ChaSan"       "metagenomeseq__Zlebia" "deseq__Linzer_torte"  

prepro_ids <- steps_ids(test_rec, type = "prepro")
prepro_ids
#> [1] "subset_taxa__Boyoz"     "filter_taxa__Charlotte"