Add a legacy taxonomic level of interest to a recipe

add_tax() is deprecated. Supply tax_level to add_model() instead.

Usage

add_tax(rec, tax_info)

Arguments

rec

A Recipe object (must not be prepped).

tax_info

A character string of taxonomic levels that will be used in any context.

Value

A Recipe object.

Examples

data(metaHIV_phy)
rec <- recipe(metaHIV_phy)
rec <- suppressWarnings(add_tax(rec, tax_info = "Species"))
rec
#> ── DAR Recipe ──────────────────────────────────────────────────────────────────
#> Inputs:
#> 
#>      ℹ phyloseq object with 451 taxa and 156 samples 
#>      ✖ undefined analysis target. Use add_model() to define the analysis! 
#>      ℹ taxonomic level Species 
#> 
#>