Returns data.frame with OTU intersection between methods

Usage

intersection_df(
  rec,
  steps = steps_ids(rec, "da"),
  tidy = FALSE,
  target = NULL,
  contrast_id = NULL
)

Arguments

rec: A PrepRecipe object.
steps: character vector with step_ids to take in account.
tidy: Boolean indicating if result must be in tidy format.
target: Optional modeled target to include.
contrast_id: Optional modeled contrast identifier to include.

Value

data.frame class object

Examples

data(test_prep_rec)
df <- intersection_df(test_prep_rec)
head(df)
#>   taxa_id maaslin__Welsh_cake deseq__Coussin_de_Lyon
#> 1   Otu_1                   0                      0
#> 2  Otu_10                   0                      0
#> 3  Otu_18                   0                      0
#> 4  Otu_34                   0                      1
#> 5  Otu_35                   1                      1
#> 6  Otu_37                   1                      0