Phyloseq object from metaHIV project

A phyloseq object containing the abundance table, sample metadata and taxonomic annotations supplied for the metaHIV project associated with Noguera-Julian et al. (2016). It is provided as a software example. The profiling pipeline and the measurement units of this derived table have not been independently verified; integer values alone do not establish that a table contains raw read counts.

Usage

data("metaHIV_phy")

Format

A phyloseq object with 451 taxa, 156 samples, 3 sample variables and 7 taxonomic ranks.

Source

Noguera-Julian et al. (2016), doi:10.1016/j.ebiom.2016.01.032 .